Seq - Programming language

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Seq is a programming language created in 2019.

#921on PLDB

5Years Old

Download source code:

git clone https://github.com/seq-lang/seq

A high-performance, Pythonic language for bioinformatics

Seq is developed on GitHub and has 696 stars
Seq first developed in Massachusetts Institute of Technology
Seq is written in C++ & Python & reStructuredText & JSON & CMake & Markdown & TypeScript & YAML & Bourne shell & JavaScript & Make & Dockerfile
Read more about Seq on the web: 1.

Example from the web:

from sys import argv
from genomeindex import *

# index and process 20-mers
def process(kmer: k20, index: GenomeIndex[k20]):
 prefetch index[kmer], index[~kmer]
 hits_fwd = index[kmer]
 hits_rev = index[~kmer]